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jhanquar

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  1. Hello i'm a mongodb user and i'm testing a script. I'm sure that in the collection features there are json documents. But when I use the find function it gives me a null can someone help me please <?php $m= new Mongo(); echo '1++++++++++++'; var_dump($m); $mongodb = $m->arraycghbase_mongo; echo '2------------'; var_dump($mongodb); $features = $mongodb->features; var_dump($features); echo '3++++++++++'; $results = $features->find(); var_dump($results); echo '4-----------'; ?>
  2. Hello i need to converse a mysql db to mongo db but i have problems with getting my variables out of the map reduce, i keep getting a error on $experiments->update(array("qc" => array("stn1" => $stn1, "stn2" => $stn2))); this is the error Fatal error: Call to a member function update() on a non-object. Can someone please help me? $map = new MongoCode("function() { emit(this.exp,{ch1: parseFloat(this.ch1_b), ch2: parseFloat (this.ch2_b), count: 1 });}"); $reduce = new MongoCode (" function (key, vals){ var ret = { ch1: 0, ch2: 0, count: 0}; for(var i = 0; i < vals.length; i++){ ret.ch1 += vals.ch1; ret.ch2 += vals.ch2; ret.count += vals.count;} return ret;}"); $finalize = new MongoCode("function(key, val){ val.ch1avg = (val.ch1 / val.count); val.ch2avg = (val.ch2 / val.count); return val;}"); $result = $mongodb->command(array( "mapreduce" => "features", "map" => $map, "reduce" => $reduce, "finalize" => $finalize, "query" => array("exp" => $experiment_id), "out" => "features_averages" )); $avgresult = $mongodb->features_averages->find(); $avgresult=$avgresult->getNext(); print_R($avgresult); //$stn = iterator_to_array($cursor); //$query="SELECT avg(ch1_signal_to_background) as stn1, avg(ch2_signal_to_background) as stn2 FROM feature WHERE experiment_id=".$experiment_id." and chromosome >'0' and flag_m='0' "; //$stn=fetch_row($query); //$stn1=round($stn['stn1'],2); //$stn2=round($stn['stn2'],2); //var_dump($stn1nr); $stn1nr = $avgresult['ch1avg']; $stn2nr = $avgresult['ch2avg']; echo "---------------"; var_dump($stn1nr); $stn1=round($stn1nr,2); $stn2=round($stn2nr,2); echo "---------------"; $experiments->update(array("qc" => array("stn1" => $stn1, "stn2" => $stn2))); echo "<font color=\"#00cc00\">[".date("G:i:s")."] Signal to noise red {$stn1}<br>\r\n"; echo "[".date("G:i:s")."] Signal to noise green {$stn2}<br>\r\n";
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